Experimental data of Pseudomonas putida biofilm development experiments in flat and rough microfluidic channels
Wei, Guanju
Yang, Judy Q
Yang, Judy Q
2022-05-09
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2021-11-17
2021-03-30
2021-03-30
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2022-04-30
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Title
Experimental data of Pseudomonas putida biofilm development experiments in flat and rough microfluidic channels
Published Date
2022-05-09
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Yang, Judy
judyyang@umn.edu
judyyang@umn.edu
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Dataset
Experimental Data
Programming Software Code
Experimental Data
Programming Software Code
Abstract
This dataset consists of the codes, experimental data, and raw images of the Pseudomonas putida biofilm development experiments. They are all collected in the Saint Anthony Falls Laboratory at the University of Minnesota. The codes are used for processing the raw images to calculate the biofilm thickness. The experimental data file contains the experiment parameters and the data after processing. The image file contains the raw images collected using the Nikon confocal microscope.
Description
The images file contains the raw images collected using Nikon confocal microscope. The codes are used for processing these raw images to calculate the biofilm thickness. The experimental data file contains the experiment parameter and the data after processing.
Referenced by
Wei, G., & Yang, J. Q. (2023). Impacts of hydrodynamic conditions and microscale surface roughness on the critical shear stress to develop and thickness of early‐stage Pseudomonas putida biofilms. Biotechnology and Bioengineering.
https://doi.org/10.1002/bit.28409
https://doi.org/10.1002/bit.28409
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This study was supported by Judy Yang's startup funds and University of Minnesota's MnDRIVE Environment seed grant.
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Wei, Guanju; Yang, Judy Q. (2022). Experimental data of Pseudomonas putida biofilm development experiments in flat and rough microfluidic channels. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/afnk-kp31.
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