Data for DNA fragmentation in a steady shear flow
Qiao, Yiming
Ma, Zixue
Onyango, Clive
Cheng, Xiang
Dorfman, Kevin D
Ma, Zixue
Onyango, Clive
Cheng, Xiang
Dorfman, Kevin D
2022-09-23
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2021-05-31
2022-08-31
2022-08-31
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2022-08-31
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Title
Data for DNA fragmentation in a steady shear flow
Published Date
2022-09-23
Author Contact
Qiao, Yiming
qiao0017@umn.edu
qiao0017@umn.edu
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Experimental Data
Programming Software Code
Experimental Data
Programming Software Code
Abstract
We have determined the susceptibility of T4 DNA (166 kilobase pairs, kbp) to fragmentation under steady shear in a cone-and-plate rheometer.
Description
The data includes Pulsed-field gel electrophoresis (PFGE) images and all the data used to generate the figures in the article.
Referenced by
Qiao, Yiming; Ma, Zixue; Onyango, Clive; Cheng, Xiang; Dorfman, Kevin D. (2022). DNA fragmentation in a steady shear flow. Biomicrofluidics.
https://doi.org/10.1063/5.0109361
https://doi.org/10.1063/5.0109361
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NIH R21-HG011251
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Qiao, Yiming; Ma, Zixue; Onyango, Clive; Cheng, Xiang; Dorfman, Kevin D. (2022). Data for DNA fragmentation in a steady shear flow. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/tsva-hn81.
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Image_Analysis.zip
MATLAB codes to process the PFGE data
(7.02 KB)
Figure_Data.zip
Raw PFGE images and the corresponding data sets
(19.77 MB)
Automate_Python.zip
Example of how to use Python to extract information from the excel files in the folders in Figure_Data.zip
(398.07 KB)
README.txt
Description of data
(6.97 KB)
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