Data for: Diffusion of Knots along DNA Confined in Nanochannels

Ma, Zixue
Dorfman, Kevin D
2020-08-05
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Persistent link to this item

https://doi.org/10.13020/5nqr-b219
 https://hdl.handle.net/11299/214917
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Collection period

2019-08-22
2019-12-23

Date completed

2020-3

Date updated

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Title

Data for: Diffusion of Knots along DNA Confined in Nanochannels

Published Date

2020-08-05

Authors

Group

University of Minnesota Dorfman Research Lab

Author Contact

Ma, Zixue
ma000052@umn.edu

Type

Dataset
Experimental Data
Programming Software Code

Abstract

We study the diffusion of knots along relaxed DNA in nanochanels using a nanofluidic "knot factory" device for knot generation. The knot diffusion data for the article is published as "Diffusion of knots along DNA Confined in Nanochannels" in Macromolecules. The data includes DNA images before and after knot generation and all the data used to generate the figures in the article.

Description

MATLAB codes, figure data, DNA images

Referenced by

Ma, Zixue, & Dorfman, Kevin D. (2020). Diffusion of Knots along DNA Confined in Nanochannels. Macromolecules, 53(15), 6461-6468.
https://doi.org/10.1021/acs.macromol.0c00561

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License

CC0 1.0 Universal
 http://creativecommons.org/publicdomain/zero/1.0/

Publisher

Collections

Data Repository for U of M (DRUM)
Dorfman Group Research Data

Funding information

Sponsorship: NIH (R01-HG006851) and NSF (CBET-2016879)

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Suggested citation

Ma, Zixue; Dorfman, Kevin D. (2020). Data for: Diffusion of Knots along DNA Confined in Nanochannels. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/5nqr-b219.

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Description
Size
Image_Analysis.zip
MATLAB codes for DNA image analysis
(49.19 KB)

Figure_Data.zip
Data and MATLAB codes used to generate figures
(2.6 MB)

Videos.zip
DNA images
(23.72 GB)

ReadMe.txt
Documentation of the Data and MATLAB codes
(5.49 KB)

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