Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time"

Johnson, Timothy
Torres, Sheila
Danzeisen, Jessica
Clayton, Jonathan
Ward, Tonya
Knights, Dan
Huang, Hu
2016-11-17
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http://doi.org/10.13020/D6W01V
 https://hdl.handle.net/11299/183048
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Collection period

2013-09-01
2014-07-01

Date completed

2016-11-16

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Title

Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time"

Published Date

2016-11-17

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Author Contact

Johnson, Timothy
joh04207@umn.edu

Type

Dataset
Genomics Data

Abstract

This related study sampled 40 dogs from 20 households over the course of three seasons. Three skin sites were examined. The goal of the study was to determine if a core skin microbiome exists in dogs across time and body site, and if cohabitation impacts sharing of the skin microbiome. This dataset is a part of the Torres_Johnson Canine Microbiome Study.

Description

Dataset from sampling of 40 dogs over three time points. Dogs were paired across 20 households. Data is in raw fastq format from amplicon sequencing of the V1-V3 regions of the 16S rRNA gene using Illumina MiSeq.

Referenced by

Torres S, Clayton JB, Danzeisen JL, Ward T, Huang H, Knights D, Johnson TJ. (2017) Diverse bacterial communities exist on canine skin and are impacted by cohabitation and time. PeerJ 5:e3075
https://doi.org/10.7717/peerj.3075

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License

CC0 1.0 Universal Public Domain Dedication
 http://creativecommons.org/publicdomain/zero/1.0/

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Data Repository for U of M (DRUM)

Funding information

Morris Animal Foundation grant D13CA-037

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Suggested citation

Johnson, Timothy; Torres, Sheila; Danzeisen, Jessica; Clayton, Jonathan; Ward, Tonya; Knights, Dan; Huang, Hu. (2016). Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time". Retrieved from the Data Repository for the University of Minnesota (DRUM), http://doi.org/10.13020/D6W01V.
View/Download file
File View/OpenDescriptionSize
SP_1_through_5_fastq.zipfastq files of Sp1 through Sp5 samples754.98 MB
SP_6_through_10_fastq.zipfastq files of Sp6 through Sp10 samples963.51 MB
SP_11_through_15_fastq.zipfastq files of Sp11 through Sp15 samples1.02 GB
SP_16_through_20_fastq.zipfastq files of Sp16 through Sp20 samples815.39 MB
SU_1_through_5_fastq.zipfastq files of Su1 through Su5 samples486.96 MB
SU_6_through_10_fastq.zipfastq files of Su6 through Su10 samples578.76 MB
SU_11_through_15_fastq.zipfastq files of Su11 through Su15 samples788.5 MB
SU_16_through_20_fastq.zipfastq files of Su16 through Su20 samples472.55 MB
W_1_through_10_fastq.zipfastq files of W1 through W10 samples716.61 MB
W_11_through_15_fastq.zipfastq files of W11 through W15 samples605.72 MB
W_16_through_20_fastq.zipfastq files of W16 through W20 samples662.67 MB
mapping.txtMetadata mapping file with sample names61.37 KB
codebook.txtCode book for mapping.txt943 B

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