Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time"
2016-11-17
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2013-09-01
2014-07-01
2014-07-01
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2016-11-16
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Title
Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time"
Published Date
2016-11-17
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Author Contact
Johnson, Timothy
joh04207@umn.edu
joh04207@umn.edu
Type
Dataset
Genomics Data
Genomics Data
Abstract
This related study sampled 40 dogs from 20 households over the course of three seasons. Three skin sites were examined. The goal of the study was to determine if a core skin microbiome exists in dogs across time and body site, and if cohabitation impacts sharing of the skin microbiome. This dataset is a part of the Torres_Johnson Canine Microbiome Study.
Description
Dataset from sampling of 40 dogs over three time points. Dogs were paired across 20 households. Data is in raw fastq format from amplicon sequencing of the V1-V3 regions of the 16S rRNA gene using Illumina MiSeq.
Referenced by
Torres S, Clayton JB, Danzeisen JL, Ward T, Huang H, Knights D, Johnson TJ. (2017) Diverse bacterial communities exist on canine skin and are impacted by cohabitation and time. PeerJ 5:e3075
https://doi.org/10.7717/peerj.3075
https://doi.org/10.7717/peerj.3075
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Morris Animal Foundation grant D13CA-037
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Suggested citation
Johnson, Timothy; Torres, Sheila; Danzeisen, Jessica; Clayton, Jonathan; Ward, Tonya; Knights, Dan; Huang, Hu. (2016). Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time". Retrieved from the Data Repository for the University of Minnesota (DRUM), http://doi.org/10.13020/D6W01V.
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Description
Size
SP_1_through_5_fastq.zip
fastq files of Sp1 through Sp5 samples
(754.98 MB)
SP_6_through_10_fastq.zip
fastq files of Sp6 through Sp10 samples
(963.51 MB)
SP_11_through_15_fastq.zip
fastq files of Sp11 through Sp15 samples
(1.02 GB)
SP_16_through_20_fastq.zip
fastq files of Sp16 through Sp20 samples
(815.39 MB)
SU_1_through_5_fastq.zip
fastq files of Su1 through Su5 samples
(486.96 MB)
SU_6_through_10_fastq.zip
fastq files of Su6 through Su10 samples
(578.76 MB)
SU_11_through_15_fastq.zip
fastq files of Su11 through Su15 samples
(788.5 MB)
SU_16_through_20_fastq.zip
fastq files of Su16 through Su20 samples
(472.55 MB)
W_1_through_10_fastq.zip
fastq files of W1 through W10 samples
(716.61 MB)
W_11_through_15_fastq.zip
fastq files of W11 through W15 samples
(605.72 MB)
W_16_through_20_fastq.zip
fastq files of W16 through W20 samples
(662.67 MB)
mapping.txt
Metadata mapping file with sample names
(61.37 KB)
codebook.txt
Code book for mapping.txt
(943 B)
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