Alpha-defensin gene single nucleotide polymorphism shapes the gut microbiota

Rashidi, Armin
Herman, Adam
Wang, Jinhua
Blazar, Bruce
Weisdorf, Daniel
2019-04-24
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https://doi.org/10.13020/9wn7-9142
 https://hdl.handle.net/11299/202578
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Alpha-defensin gene single nucleotide polymorphism shapes the gut microbiota

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2019-04-24

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Division of Hematology, Oncology, and Transplantation - Department of Medicine

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Herman, Adam
aherman@umn.edu

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Genomics Data
Human Subjects Data
Statistical Computing Software Code

Abstract

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Deposited here are human genome data comprising genotypes of 95 Human Microbiome Project participants (de-identified) at two SNPs, operational taxonomic unit (OTU) tables for metagenome assemblies from those individuals, and the R code used for for data analysis

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CC0 1.0 Universal
 http://creativecommons.org/publicdomain/zero/1.0/

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Data Repository for U of M (DRUM)

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Rashidi, Armin; Herman, Adam; Wang, Jinhua; Blazar, Bruce; Weisdorf, Daniel. (2019). Alpha-defensin gene single nucleotide polymorphism shapes the gut microbiota. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/9wn7-9142.
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File View/OpenDescriptionSize
transpose_mphlan2_otu_table.txtMetaphlan2_otu_table221.81 KB
defa5_snps.vcfdefa5_snps1.43 KB
rashidi_lasso.RLasso_analysis_script3.48 KB

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