Data for Catalytic Resonance Theory: Circumfluence of Programmable Catalytic Loops
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2023-06-04
2023-08-30
2023-08-30
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2023-08-27
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Title
Data for Catalytic Resonance Theory: Circumfluence of Programmable Catalytic Loops
Published Date
2023-11-16
Author Contact
Murphy, Madeline, A
murp1677@umn.edu
murp1677@umn.edu
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Abstract
Chemical reactions on heterogeneous catalyst surfaces exhibit complex networks of elementary reactions with multiple pathways to fluid phase products, sometimes leading to surface reaction loops consisting of a closed cycle reaction pathway. While conventional catalysts at steady state exhibit zero net flux in either direction around a catalytic loop, the loop turnover frequency of three-species surface loops was evaluated in this work via microkinetic modeling to assess the reaction loop behavior resulting from a catalytic surface oscillating between two or more surface energy states. For dynamic heterogeneous catalysts undergoing applied oscillations of surface energy (i.e., programs), surface reaction loops of three species were shown to exhibit non-zero net flow of molecules around the loop, with the extent of loop turnover frequency varying with the applied frequency and amplitude of a sinusoidal or square wave oscillation. Alternatively, some dynamic surface reactions exhibited oscillations only between two surface species or resulted in surfaces covered by a single species at all times. More complex behavior was observed for dynamic surface programs of three distinct electronic states, with the temporal order of applied states controlling the direction of flow of molecules within a three-molecule surface loop. Catalytic loops have the potential to limit overall catalytic reaction rates and use energy in programmable catalysts, while some applications could purposely impose non-zero loop turnover frequency for improved surface reaction control.
Description
Scripts written in Julia 1.9.0 and all relevant data files included for the case studies including in Catalytic Resonance Theory: Circumfluence of Programmable Catalytic Loops. Batch scripts used to submit the files to run through the Minnesota Supercomputing Institute's slurm workload manager are also included.
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https://doi.org/10.26434/chemrxiv-2023-xmb84
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Murphy, Madeline A; Gathmann, Sallye R; Bartel, Chris. (2023). Data for Catalytic Resonance Theory: Circumfluence of Programmable Catalytic Loops. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/cng1-fb88.
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CaseStudy_Results_README.txt
Description of data
(11.16 KB)
Murphy_Loop_JuliaCodes.zip
Zip File containing all Julia scripts used to run simulations with two distinct catalyst states
(12.34 KB)
Murphy_Loop_3State_JuliaCodes.zip
Zip File containing all Julia scripts used to run simulations with three distinct catalyst states
(10.76 KB)
CaseStudyData.zip
Zip file containing all simulation results and figures.
(378.73 MB)
Input and Output definitions.pdf
Input and output definitions
(581.66 KB)
DynamicLoop-CaseStudy.slurm
Batch script used to submit batches of simulations with two distinct catalyst states as a single job to the Minnesota Supercomputing Institute
(892 B)
DynamicLoop-CaseStudy-3State.slurm
Batch script used to submit batches of simulations with three distinct catalyst states as a single job to the Minnesota Supercomputing Institute.
(908 B)
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