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Browsing by Author "Elbein, Kris"

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    Data for Multiparametric Identification of Putative Senescent Cells in Skeletal Muscle via Mass Cytometry
    (2024-05-02) Baig, Nameera; Li, Yijia; Roncancio, Daniel; Elbein, Kris; Lowe, Dawn; Kyba, Michael; Arriaga, Edgar A; arriaga@umn.edu; Arriaga, Edgar A; University of Minnesota, Arriaga Lab
    This study includes three sets of compressed files: the original data (35 FCS documents collected from the CyTOF2 instrument per mouse), the gating results (FCS files gated based on the diagram in Figure S1 of the article 'Multiparametric Identification of Putative Senescent Cells in Skeletal Muscle via Mass Cytometry', with 35 per mouse for each cell type) and the batch corrected gating results (CSV files for each cell type). Also included is an ipynb file for a Jupyter notebook used for data analysis. This notebook reproduces the analysis pipeline and generates some plots used in the manuscript. The batch corrected gating results serve as the input for this analysis.