R code and output supporting: Time series sightability modeling of animal populations
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2005
2016
2016
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Northeastern Minnesota
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This work represents original analysis and interpretation of Minnesota Department of Natural Resources moose survey (sightability trials and operational surveys) data.
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ArchMiller, Althea A
althea.archmiller@gmail.com
althea.archmiller@gmail.com
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Abstract
The goal of our study was to expand a previously developed model-based approach to include random effects and a temporal spline for time series modeling of multiple years of operational survey data. We developed a Bayesian hierarchical model as our framework to build and compare fixed-effects and temporal model-based sightability models applied to 12 years of MN moose operational survey data. Here, we share the Program R code and data necessary to replicate the manuscript results that demonstrate how our time series sightability modeling approach can increase the precision of population estimators and predict population dynamics with smoother (and thus more realistic trends) through time.
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Referenced by
ArchMiller, Dorazio, St. Clair, Fieberg. 2018. Time series sightability modeling of animal populations. PLOS ONE.
https://doi.org/10.1371/journal.pone.0190706
https://doi.org/10.1371/journal.pone.0190706
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Attribution-NonCommercial-ShareAlike 3.0 United States
http://creativecommons.org/licenses/by-nc-sa/3.0/us/
http://creativecommons.org/licenses/by-nc-sa/3.0/us/
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Minnesota Department of Natural Resources
Wildlife Restoration (Pittman-Robertson) Program
Minnesota Agricultural Experimental Station
Wildlife Restoration (Pittman-Robertson) Program
Minnesota Agricultural Experimental Station
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ArchMiller, Althea A; Fieberg, John R; Dorazio, Robert M; St. Clair, Katherine. (2017). R code and output supporting: Time series sightability modeling of animal populations. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/D6N30B.
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a_define_sightability_model.html
JAGS model definition: sightability model
(15.55 KB)
a_define_FE_model.html
JAGS model definition: fixed-effect model
(17.83 KB)
a_define_TS_model.html
JAGS model definition: temporal spline model
(18.64 KB)
a_define_joint_model.html
JAGs model definition: joint models
(26.7 KB)
b_augment_data.html
Augment data for analysis
(24.77 KB)
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