EPISNPmpi Software

Ma, Li
Runesha, Hakizumwami Birali
Dvorkin, Daniel
Garbe, John
Da, Yang
2011-09-16
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episnpmpi_2-0_voltaire_suse_em64t.tar.gz (788.09 KB)
 episnpmpi_v2-0_ibm_aix_pwr.tar.gz (149.81 KB)
 episnpmpi_v4-2.zip (5.78 MB)
 episnpmpi_2-0_intelmpi_suse_amd.tar.gz (726.16 KB)
 episnpmpi_2-0_openmpi_suse_em64t.tar.gz (1.07 MB)

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https://hdl.handle.net/11299/276215
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Title

EPISNPmpi Software

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Published Date

2011-09-16

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Abstract

EPISNPmpi is a parallel computing program for epistasis testing in genome-wide association studies for supercomputers and commodity clusters.

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Description

Version 4.2, 09/16/2011. Available for various parallel computing platforms as follows: -Voltaire MPI Library, Intel Complier, Intel Processor: EPISNPmpi_2.0_Voltaire_intel_intel.tar.gz (788 kB) -Voltaire MPI Library, Intel Complier, AMD Processor: EPISNPmpi_2.0_Voltaire intel_AMD.tar.gz (727 kB) -Voltaire MPI Library, Intel Complier, Intel (EM64T) Processor: EPISNPmpi_2.0_Voltaire suse_EM64T.tar.gz (789 kB) -PathMPI MPI Library, Pathscale Compiler, AMD Processor: EPISNPmpi_2.0_Pathscale_suse_AMD.tar.gz (637 kB) -IntelMPI MPI Library, Intel Processor, AMD Processor: EPISNPmpi_2.0_intelMPI_suse_AMD.tar.gz (727 kB) -OpenMPI MPI Library, Intel Compiler, Intel (EM64T) Processor: EPISNPmpi_2.0_OpenMPI_suse_EM64T.tar.gz (1.1 MB) -IBM MPI MPI Library, Intel Compiler, Power4 Processor: EPISNPmpi_2.0_IBM_AIX_pwr.tar.gz (150 kB) -MPT MPI Library, IntelCompiler, Itanium Processor: EPISNPmpi_4.2.zip (5.78 MB)

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Software Tools for Animal Gene Mapping and Genomic Selection

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Previously Published Citation

Ma L., H.B. Runesha, D. Dvorkin, J.R. Garbe, and Y. Da. (2008) Parallel and serial computing tools for testing single-locus and epistatic SNP effects of quantitative traits in genome-wide association studies. BMC Bioinformatics 9:315. Article URL: www.biomedcentral.com/1471-2105/9/315.

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Suggested Citation

Ma, Li; Runesha, Hakizumwami Birali; Dvorkin, Daniel; Garbe, John; Da, Yang. (2011). EPISNPmpi Software. Retrieved from the University Digital Conservancy, https://hdl.handle.net/11299/276215.

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