Data supporting: Seed Shattering in Wild Rice: Developmental and Genomic Signatures of Early Domestication

Millas, Reneth
McGilp, Lillian
Mickelson, Alan
Banting, Maybell
Castell-Miller, Claudia
Kimball, Jennifer
2025-11-14
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Persistent link to this item

https://doi.org/10.13020/q7w7-gj62
 https://hdl.handle.net/11299/276930
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Collection period

2021
2025

Date completed

2025-07

Date updated

Time period coverage

Geographic coverage

Source information

Journal Title

Journal ISSN

Volume Title

Title

Data supporting: Seed Shattering in Wild Rice: Developmental and Genomic Signatures of Early Domestication

Published Date

2025-11-14

Authors

Group

University of Minnesota Wild Rice Research Program

Author Contact

Kimball, Jennifer
jkimball@umn.edu

Type

Dataset
Experimental Data
Genomics Data

Abstract

This data is from a study conducted in Zizania palustris (wild rice) to 1) Assess the phenotypic variation in seed shattering 2) Examine the abscission layer anatomy of cultivated versus wild populations 3) Compare putative homologs of Oryza sativa shattering genes in Z. palustris and Zizania latifolia and 4) Evaluate the expression of putative O. sativa homologs in Zizania palustris across stages of panicle development and seed maturation. The data is being released as part of the publication of the study.

Description

Orthogroups.tsv contains a file generated in Orthofinder version 2.5.4 of the orthogroups found between Zizania palustris, Zizania latifolia and Oryza sativa DRUM_ReadMe.txt contains a read me file which describes the data.

Referenced by

Reneth Millas, Lillian McGilp, Alan Mickelson, Maybell Banting, Claudia Castell-Miller, Jennifer Kimball. Seed Shattering in a North American Oryzeae grain: Developmental and Genomic Signatures of Early Domestication, 14 July 2025, PREPRINT (Version 1) available at Research Square
https://doi.org/10.21203/rs.3.rs-7032638/v1

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License

Attribution 4.0 International
 http://creativecommons.org/licenses/by/4.0/

Publisher

Collections

Data Repository for U of M (DRUM)

Funding information

This work was supported by the State of Minnesota, Agricultural Research, Education, Extension and Technology Transfer program.

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Suggested citation

Millas, Reneth; McGilp, Lillian; Mickelson, Alan; Banting, Maybell; Castell-Miller, Claudia; Kimball, Jennifer. (2025). Data supporting: Seed Shattering in Wild Rice: Developmental and Genomic Signatures of Early Domestication. Retrieved from the Data Repository for the University of Minnesota (DRUM), https://doi.org/10.13020/q7w7-gj62.

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Description
Size
Orthogroups.tsv
Ortholog information, calculated in orthofinder, between Z. palustris, Z. latifolia and O. sativa
(1.91 MB)

Readme_Kimball_2025.txt
Description of the data
(5.19 KB)

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