This codebook.txt file was generated on 2022-07-03 by Hongyu Li ------------------- GENERAL INFORMATION ------------------- 1. Title of Dataset Data supporting "Vocal sacs do not act as visual cues in acoustically guided courtship in Cope’s gray treefrog (Hyla chrysoscelis)" 2. Author Information Principal Investigator Contact Information Name: Hongyu Li Institution: University of Minnesota Email: lihongyu@gmail.com Associate or Co-investigator Contact Information Name: Katrina M. Schrode Institution: University of Minnesota Email: katrina.schrode@gmail.com Associate or Co-investigator Contact Information Name: Mark A. Bee Institution: University of Minnesota Email: mbee@umn.edu 3. Date of data collection: 2018-05-01 to 2019-06-31 4. Geographic location of data collection (where was data collected?): Minnesota 5. Information about funding sources that supported the collection of the data: National Science Foundation (IOS-1452831, 2022253) -------------------------- SHARING/ACCESS INFORMATION -------------------------- 1. Licenses/restrictions placed on the data: Attribution-NonCommercial-ShareAlike 3.0 United States 2. Links to publications that cite or use the data: http://hdl.handle.net/11299/216303 https://doi.org/10.1016/j.anbehav.2022.05.003 3. Links to other publicly accessible locations of the data: 4. Links/relationships to ancillary data sets: 5. Was data derived from another source? If yes, list source(s): The 3D model was created by modifying a pre-existing treefrog template (https://www.thingiverse.com/thing:182144) 6. Recommended citation for the data: Li, Hongyu; Schrode, Katrina M; Bee, Mark A. (2020). Data supporting "Vocal sacs do not act as visual cues in acoustically guided courtship in Cope’s gray treefrog (Hyla chrysoscelis)". Retrieved from the Data Repository for the University of Minnesota, https://hdl.handle.net/11299/214016. --------------------- DATA & FILE OVERVIEW --------------------- 1. File List A. Filename: Exp1_latency.csv Short description: Data - Exp1, part1 Long Description: Response latency to unimodal stimuli in Experiment 1. Size: 3.959Kb B. Filename: Exp1_propotion.csv Short description: Data - Exp1, part2 Long Description: Proportions of females choosing each unimodal alternatives in Experiment 1. Size: 204bytes C. Filename: Exp1_NegativeControl.csv Short description: Data - Exp1, part3 Long Description: Females' choices of unimodal stimuli in Experiment 1a. Size: 5.426Kb D. Filename: Exp1.R Short description: Statistical analysis for Exp1 Long Description: R script to analyze data for Experiment 1. Size: 6.671Kb E. Filename: Exp2_2018.csv Short description: Data - Exp2, part1 Long Description: Part of the data for Experiment 2, collected in 2018. Size: 12.00Kb F. Filename: Exp2_2019.csv Short description: Data - Exp2, part2 Long Description: Part of the data for Experiment 2, collected in 2019. Size: 5.195Kb G. Filename: Exp2.R Short description: Statistical analysis for Exp2 Long Description: R script to analyze data for Experiment 2. Size: 10.74Kb H. Filename: Exp3.csv Short description: Data - Exp3 Long Description: Female responses to SAM calls in Experiment 3. Size: 9.138Kb I. Filename: Exp3.R Short description: Statistical analysis for Exp3 Long Description: R script to analyze data for Experiment 3. Size: 8.822Kb J. Filename: Exp4.csv Short description: Data - Exp4 Long Description: Female reponses to various SNRs in Experiment 4. Size: 23.35Kb K. Filename: Exp4.R Short description: Statistical analysis for Exp4 Long Description: R script to analyze data for Experiment 4. Size: 9.378Kb 2. Relationship between files: 3. Additional related data collected that was not included in the current data package: None 4. Are there multiple versions of the dataset? No -------------------------- METHODOLOGICAL INFORMATION -------------------------- 1. Description of methods used for collection/generation of data: The data was collected by coducting phonotaxis experiments with female frogs in the field. For details, see http://hdl.handle.net/11299/216303 2. Methods for processing the data: 3. Instrument- or software-specific information needed to interpret the data: 4. Standards and calibration information, if appropriate: 5. Environmental/experimental conditions: 6. Describe any quality-assurance procedures performed on the data: 7. People involved with sample collection, processing, analysis and/or submission: Hongyu Li, Katrina M. Schrode, Mark A. Bee, Katie LaBarbera, Saumya Gupta, Lata Kalra, Miranda Dahl, Kelley Hoiseth, Chang Liu, Becky Marshall, Jordyn Massop, Annika Ruppert, Yi Fang Tan ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp1_latency.csv ----------------------------------------- 1. Number of variables: 8 2. Number of cases/rows: 74 rows 3. Missing data codes: Blank 4. Variable List A. Name: date Description: The date the data was collected on. B. Name: tester Description: People who collected the data. C. Name: frogID Description: The ID for each frog individual used in tests. D. Name: test type Description: The test condition of each specific test. Value labels: 34_26: A two-choice test with the alternatives being 34 pulses/call and 26 pulses/call. Hch_Hver: A two-choice test with the alternatives being standard calls of Hyla chrysoscelis and standard calls of Hyla versicolor. negative_control: A two-choice test with both the alternatives being standard calls of Hyla chrysoscelis. E. Name: choice Description: The alternative the subject chose in each test. Value labels: 34: The subject chose 34 pulses/call. 26: The subject chose 26 pulses/call. Hch: The subject chose standard calls of Hyla chrysoscelis. L: The subject chose the alternative on the left side in a negative control test. R: The subject chose the alternative on the right side in a negative control test. F. Name: choice_correct Description: Wherther the subject's choice was coherent with previously established preference. N/A for negative control. G. Name: choice_side Description: The position of the alternative the subject chose. Value labels: R: The subject chose the alternative on the right side. L: The subject chose the alternative on the left side. H. Name: latency Description: The time it took for the subject to complete the test. ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp1_NegativeControl.csv ----------------------------------------- 1. Number of variables: 15 2. Number of cases/rows: 55 rows 3. Missing data codes: Blank 4. Variable List A. Name: date Description: The date the data was collected on. B. Name: frogID Description: The ID for the subject used in the test. C. Name: frogID Description: The ID for the subject used in the test. The code is a unique ID among all frogs collected in the year. D. Name: tester Description: People who collected the data. E. Name: Orientation Description: The orientation of the arena. Value labels: W: The release cup was on the west side. E: The release cup was on the east side. N: The release cup was on the north side. S: The release cup was on the north side. F. Name: time Description: The time period the test was conducted. G. Name: temp_low Description: The lowest temperature during the time period. H. Name: temp_high Description: The highest temperature during the time period. I. Name: pulse_rate Description: The pulse rate of the calls used in the test. J. Name: light_initial Description: The illumination measured at the beginnning of the time period. K. Name: light_end Description: The illumination measured at the end of the time period. L. Name: SPK_left Description: The speaker ID of the speaker on the left side. M. Name: choice_side Description: The position of the alternative the subject chose. Value labels: R: The subject chose the alternative on the right side. L: The subject chose the alternative on the left side. N. Name: order_left Description: Whether the stimuli on the left was presented first or after the other alternative in the alternating cycle. Value labels: Lead: The stimuli on the left was presented first. Lag: The stimuli on the right was presented first. O. Name: latency Description: The time it took for the subject to complete the test. ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp1_proportion.csv ----------------------------------------- 1. Number of variables: 7 2. Number of cases/rows: 4 rows 3. Missing data codes: None 4. Variable List A. Name: test_type Description: The test condition for each specific test. Pulse number: Pulse-number discrimination tests. Species: Species discrimination tests. Negative control: B. Name: choice_correct Description: The number of subjects whose choices were coherent with previously established preference. For negative control, the correct choice was arbitrarily designated as the left side. C. Name: choice_wrong Description: The number of subjects whose choices were not coherent previously the established preference. For negative control, the wrong choice was arbitrarily designated as the right side. D. Name: n Description: The sample size E. Name: p Description: The proportion of correct choices. F. Name: CI_low Description: The lower confidence interval of p. G. Name: CI_high Description: The upper confidence interval of p. ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp2_2018.csv ----------------------------------------- 1. Number of variables: 14 2. Number of cases/rows: 143 rows 3. Missing data codes: Blank 4. Variable List A. Name: date Description: The date the data was collected on. B. Name: frogID Description: The ID for the subject used in the test. C. Name: frogID Description: The ID for the subject used in the test. The code is a unique ID among all frogs collected in the year. D. Name: tester Description: People who collected the data. E. Name: Orientation Description: The orientation of the arena. Value labels: W: The release cup was on the west side. E: The release cup was on the east side. N: The release cup was on the north side. S: The release cup was on the south side. F. Name: time Description: The time period the test was conducted. G. Name: temp_low Description: The lowest temperature during the time period. H. Name: temp_high Description: The highest temperature during the time period. I. Name: pulse_rate Description: The pulse rate of the calls used in the test. J. Name: test_type Description: The test condition of each specific test. Value labels: SM vs call: A two-choice test with the alternatives being SM+call and call alone. DM vs call: A two-choice test with the alternatives being DM+call and call alone. DM vs SM: A two-choice test with the alternatives being DM+call and SM+call. K. Name: choice Description: The alternative the subject chose in each test. Value labels: SM: The subject chose SM+call. CALL: The subject chose call alone. DM: The subject chose DM+call. L. Name: SIDE Description: The position of the alternative that the subject chose. Value labels: 1: The subject chose the alternative on the left side. 2: The subject chose the alternative on the right side. M. Name: LEADS Description: Whether the stimuli on the left side was presented first or after the other alternative in the alternating cycle. 1: The stimuli on the left was presented first. 2: The stimuli on the right was presented first. N. Name: latency Description: The time it took for the subject to complete the test. ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp2_2019.csv ----------------------------------------- 1. Number of variables: 12 2. Number of cases/rows: 89 rows 3. Missing data codes: Blank 4. Variable List A. Name: date Description: The date the data was collected on. B. Name: frogID Description: The ID for the subject used in the test. C. Name: tester Description: People who collected the data. D. Name: SPL Description: The sound pressure level (dB) the acoustic stimuli were broadcast at. E. Name: choice Description: The alternative the subject chose in each test. Value labels: SM: The subject chose SM+call. DM: The subject chose DM+call. F. Name: choice_side Description: The position of the alternative the subject chose. Value labels: Left: The subject chose the alternative on the left side. Right: The subject chose the alternative on the right side. G. Name: time_initial Description: The time the test started. H. Name: time_end Description: The time the test ended. I. Name: latency Description: The time it took for the subject to complete the test. J. Name: light_initial Description: The illumination measured at the time most approximate to when the test started if no measurement was made during the test. K. Name: light_middle Description: The illumination measured at the time most approximate to when the test ended if no measurement was made during the test. L. Name: light_end Description: The illumination measured during the test. ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp3.csv ----------------------------------------- 1. Number of variables: 15 2. Number of cases/rows: 91 rows 3. Missing data codes: Blank 4. Variable List A. Name: date Description: The date the data was collected on. B. Name: frogID Description: The ID for the subject used in the test. The code is a unique ID among all frogs collected in the year. C. Name: Orientation Description: The orientation of the arena. Value labels: W: The release cup was on the west side. E: The release cup was on the east side. N: The release cup was on the north side. N: The release cup was on the south side. D. Name: tester Description: People who collected the data. E. Name: time Description: The time period the test was conducted. F. Name: temp_low Description: The lowest temperature during the time period. G. Name: temp_high Description: The highest temperature during the time period. H. Name: pulse_rate Description: The pulse rate of calls used in the test. I. Name: light_initial Description: The illumination at the beginning of the time period. J. Name: light_end Description: The illumination at the end of the time period. K. Name: Stimulus Description: The stimulus used in the test. Value labels: HchDM: DM + acoustic stimulus HchSM: SM + acoustic stimulus Hch: Acoustic stimulus alone L. Name: threshold Description: The response threshold for the subject to respond to the stimulus. M. Name: order Description: The order for the stimulus with which the subject was tested among the 3 stimulus types. N. Name: previous_tests Description: The number of previous tests the subject had gone through before the one that determined the threshold. O. Name: latency Description: The time it took for the subject to complete the test. ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: Exp4.csv ----------------------------------------- 1. Number of variables: 9 2. Number of cases/rows: 482 rows 3. Missing data codes: Blank 4. Variable List A. Name: date Description: The date the data was collected on. B. Name: frogNum Description: The ID for the subject used in the test. C. Name: tester Description: People who collected the data. D. Name: stimulus The stimulus used in the test. Value labels: DM: DM+acoustic stimulus SM: SM+acoustic stimulus call: Acoustic stimulus alone E. Name: SPL Description: The sound pressure level (dB) at which the acoustic signal was broadcast in the test. F. Name: response Description: Whether the subject enterned the response zone or not. G. Name: time_initial Description: The time when the test began. H. Name: time_end Description: The time when the test ended. I. Name: duration Description: The time it took for the subject to complete the test.