This readme.txt file was generated on 2024-05-02 Recommended citation for the data: Baig, Nameera; Li, Yijia; Roncancio, Daniel; Elbein, Kris; Lowe, Dawn; Kyba, Michael; Arriaga, Edgar A. (2024). Data for Multiparametric Identification of Putative Senescent Cells in Skeletal Muscle via Mass Cytometry. Retrieved from the Data Repository for the University of Minnesota, https://doi.org/10.13020/06hn-xq85. ------------------- GENERAL INFORMATION ------------------- 1. Title of Dataset: Multiparametric Identification of Putative Senescent Cells in Skeletal Muscle via Mass Cytometry 2. Author Information Author Contact: Arriaga A Edgar (arriaga@umn.edu) Name: Yijia Li Institution: Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Twin Cities, Minneapolis, Minnesota, USA Email: li000678@umn.edu ORCID: https://orcid.org/0000-0003-2417-776X Name: Nameera Baig Institution: Department of Chemistry, University of Minnesota, Twin Cities, Minneapolis, 55455, Minnesota, USA Email: ORCID: Name: Daniel Roncancio Institution: Department of Chemistry, University of Minnesota, Twin Cities, Minneapolis, 55455, Minnesota, USA Email: ORCID: Name: Kris Elbein Institution: Department of Chemistry, University of Minnesota, Twin Cities, Minneapolis, 55455, Minnesota, USA Email: ORCID: Name: Dawn Lowe Institution: Division of Rehabilitation Science, Department of Rehabilitation Medicine, University of Minnesota, Twin Cities, Minneapolis, Minnesota Email: ORCID: Name: Michael Kyba Institution: Lillehei Heart Institute and Department of Pediatrics, Medical School, University of Minnesota, Minneapolis, MN, USA Email: ORCID: Name: Edgar A Arriaga Institution: Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Twin Cities, Minneapolis, Minnesota, USA; Department of Chemistry, University of Minnesota, Twin Cities, Minneapolis, 55455, Minnesota, USA Email: arriaga@umn.edu ORCID: https://orcid.org/0000-0001-8863-6174 3. Date published or finalized for release: 2024-05-02 4. Date of data collection (single date, range, approximate date): 2019-08 to 2023-06 5. Geographic location of data collection (where was data collected?): Minneapolis, Minnesota 6. Information about funding sources that supported the collection of the data: This work was supported by the National Institutes of Health/National Institute on Aging [R01-AG020866, R01-AG063543, R01 AG062899, R37-AG013925, T32-AG029796], and the University of Minnesota [GIA University of Minnesota]. 7. Overview of the data (abstract): This study includes three sets of compressed files: the original data (35 FCS documents collected from the CyTOF2 instrument per mouse), the gating results (FCS files gated based on the diagram in Figure S1 of the article 'Multiparametric Identification of Putative Senescent Cells in Skeletal Muscle via Mass Cytometry', with 35 per mouse for each cell type) and the batch corrected gating results (CSV files for each cell type). Also included is an ipynb file for a Jupyter notebook used for data analysis. This notebook reproduces the analysis pipeline and generates some plots used in the manuscript. The batch corrected gating results serve as the input for this analysis. -------------------------- SHARING/ACCESS INFORMATION -------------------------- 1. Licenses/restrictions placed on the data: CC0 1.0 Universal (http://creativecommons.org/publicdomain/zero/1.0/) 2. Links to publications that cite or use the data: 3. Was data derived from another source? If yes, list source(s): 4. Terms of Use: Data Repository for the U of Minnesota (DRUM) By using these files, users agree to the Terms of Use. https://conservancy.umn.edu/pages/drum/policies/#terms-of-use --------------------- DATA & FILE OVERVIEW --------------------- File List Filename: Batch corrected gating results.zip Short description: Batch corrected gating results Filename: Analysis_pipeline.ipynb Short description: Analysis_pipeline Filename: Original data.zip Short description: Original data Filename: Gating results.zip Short description: Gating results 2. Relationship between files: -------------------------- METHODOLOGICAL INFORMATION -------------------------- Please refer to the method section of manuscript 'Multiparametric Identification of Putative Senescent Cells in Skeletal Muscle via Mass Cytometry'. 1. Description of methods used for collection/generation of data: 2. Methods for processing the data: 3. Instrument- or software-specific information needed to interpret the data: 4. Standards and calibration information, if appropriate: 5. Environmental/experimental conditions: 6. Describe any quality-assurance procedures performed on the data: 7. People involved with sample collection, processing, analysis and/or submission: ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: [FILENAME] ----------------------------------------- FCS files: A. Name: ATG6 Description: ATG6 B. Name: IL6 Description: IL-6 C. Name: Kii67 Description: Kii67 D. Name: GammaH2AX Description: Gamma H2AX E. Name: p62 Description: p62 F. Name: CD206 Description: CD206 G. Name: p53 Description: p53 H. Name: VCAM1 Description: VCAM1 I. Name: MyoD Description: MyoD J. Name: Mfn1 Description: MFN1 K. Name: PDGFRalpha Description: PDGFR-alpha L. Name: GLB1 Description: GLB-1 M. Name: Lrrk2 Description: LRRK2 N. Name: MyoG Description: MYOG O. Name: Atg4a Description: ATG4A P. Name: LC3 Description: LC3 Q. Name: CD31 Description: CD31 R. Name: F480 Description: F4_80 S. Name: Alpha7int Description: Alpha-7-Integrin T. Name: Pax7 Description: PAX7 U. Name: CD45 Description: CD45 V. Name: Atg5 Description: ATG5 W. Name: CC3 Description: CC3 X. Name: CD11b Description: CD11b Y. Name: Sca1 Description: SCA1 Z. Name: GAPDH Description: GAPDH AA. Name: p21 Description: p21 AB. Name: Yb1 Description: YB1 CSV files: A. Name: ATG6 Description: ATG6 B. Name: IL6 Description: IL-6 C. Name: Kii67 Description: Kii67 D. Name: GammaH2AX Description: Gamma H2AX E. Name: p62 Description: p62 F. Name: CD206 Description: CD206 G. Name: p53 Description: p53 H. Name: VCAM1 Description: VCAM1 I. Name: MyoD Description: MyoD J. Name: Mfn1 Description: MFN1 K. Name: PDGFRalpha Description: PDGFR-alpha L. Name: GLB1 Description: GLB-1 M. Name: Lrrk2 Description: LRRK2 N. Name: MyoG Description: MYOG O. Name: Atg4a Description: ATG4A P. Name: LC3 Description: LC3 Q. Name: CD31 Description: CD31 R. Name: F480 Description: F4_80 S. Name: Alpha7int Description: Alpha-7-Integrin T. Name: Pax7 Description: PAX7 U. Name: CD45 Description: CD45 V. Name: Atg5 Description: ATG5 W. Name: CC3 Description: CC3 X. Name: CD11b Description: CD11b Y. Name: Sca1 Description: SCA1 Z. Name: GAPDH Description: GAPDH AA. Name: p21 Description: p21 AB. Name: Yb1 Description: YB1 AC. Name: Sample Description: Data source corresponding to the FCS file name in the Gating results. AD. Name: Batch Description: Signifies which mouse the data pertains to, ranging from 1-35. AE. Name: SOM Description: SOM generated by cyCombine. ---------------------------------------------- DATA TREE ---------------------------------------------- +---Batch corrected gating results | +---Batch corrected gating results | | .DS_Store | | Batch_corrected_EMP Cells.csv | | Batch_corrected_FAP Cells.csv | | Batch_corrected_M1 Macrophages.csv | | Batch_corrected_M2 Macrophages.csv | | Batch_corrected_Satellite Cells.csv | | | \---__MACOSX | | ._Batch corrected gating results | | | \---Batch corrected gating results | ._.DS_Store | ._Batch_corrected_EMP Cells.csv | ._Batch_corrected_FAP Cells.csv | ._Batch_corrected_M1 Macrophages.csv | ._Batch_corrected_M2 Macrophages.csv | ._Batch_corrected_Satellite Cells.csv | +---Gating results | +---Gating results | | | .DS_Store | | | | | +---EMP Cells | | | .DS_Store | | | export_mouse 10_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 11_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 12_0_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 13_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 14_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 15_1_0_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 16_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 17_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 18_1_0_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 19_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 1_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 20_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 21_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 22_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 23_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 24_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 25_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 26_1_0_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 27_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 28_0_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 29_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 2_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 30_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 31_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 32_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 33_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 34_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 35_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 3_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 4_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 5_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 6_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 7_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 8_1_rat, Ir191Di subset_EMPs.fcs | | | export_mouse 9_1_rat, Ir191Di subset_EMPs.fcs | | | | | +---FAP Cells | | | .DS_Store | | | export_mouse 10_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 11_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 12_0_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 13_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 14_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 15_1_0_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 16_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 17_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 18_1_0_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 19_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 1_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 20_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 21_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 22_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 23_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 24_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 25_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 26_1_0_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 27_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 28_0_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 29_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 2_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 30_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 31_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 32_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 33_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 34_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 35_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 3_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 4_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 5_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 6_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 7_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 8_1_Sca1+, alpha-7-int-_FAPs.fcs | | | export_mouse 9_1_Sca1+, alpha-7-int-_FAPs.fcs | | | | | +---M1 Macrophages | | | .DS_Store | | | export_mouse 10_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 11_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 12_0_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 13_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 14_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 15_1_0_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 16_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 17_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 18_1_0_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 19_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 1_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 20_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 21_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 22_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 23_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 24_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 25_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 26_1_0_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 27_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 28_0_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 29_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 2_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 30_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 31_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 32_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 33_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 34_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 35_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 3_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 4_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 5_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 6_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 7_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 8_1_CD11b+, CD45+_M1 Macrophages.fcs | | | export_mouse 9_1_CD11b+, CD45+_M1 Macrophages.fcs | | | | | +---M2 Macrophages | | | .DS_Store | | | export_mouse 10_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 11_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 12_0_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 13_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 14_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 15_1_0_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 16_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 17_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 18_1_0_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 19_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 1_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 20_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 21_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 22_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 23_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 24_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 25_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 26_1_0_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 27_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 28_0_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 29_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 2_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 30_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 31_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 32_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 33_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 34_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 35_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 3_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 4_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 5_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 6_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 7_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 8_1_CD11b+, CD45+_M2 Macrophages.fcs | | | export_mouse 9_1_CD11b+, CD45+_M2 Macrophages.fcs | | | | | \---Satellite Cells | | .DS_Store | | export_mouse 10_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 11_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 12_0_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 13_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 14_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 15_1_0_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 16_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 17_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 18_1_0_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 19_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 1_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 20_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 21_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 22_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 23_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 24_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 25_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 26_1_0_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 27_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 28_0_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 29_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 2_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 30_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 31_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 32_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 33_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 34_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 35_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 3_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 4_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 5_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 6_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 7_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 8_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | export_mouse 9_1_Sca1-, alpha-7-int+_Satellite cells.fcs | | | \---__MACOSX | \---Gating results | | ._.DS_Store | | ._EMP Cells | | ._FAP Cells | | ._M1 Macrophages | | ._M2 Macrophages | | ._Satellite Cells | | | +---EMP Cells | | ._.DS_Store | | ._export_mouse 10_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 11_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 12_0_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 13_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 14_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 15_1_0_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 16_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 17_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 18_1_0_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 19_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 1_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 20_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 21_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 22_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 23_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 24_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 25_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 26_1_0_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 27_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 28_0_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 29_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 2_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 30_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 31_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 32_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 33_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 34_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 35_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 3_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 4_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 5_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 6_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 7_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 8_1_rat, Ir191Di subset_EMPs.fcs | | ._export_mouse 9_1_rat, Ir191Di subset_EMPs.fcs | | | +---FAP Cells | | ._.DS_Store | | ._export_mouse 10_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 11_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 12_0_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 13_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 14_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 15_1_0_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 16_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 17_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 18_1_0_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 19_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 1_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 20_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 21_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 22_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 23_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 24_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 25_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 26_1_0_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 27_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 28_0_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 29_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 2_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 30_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 31_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 32_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 33_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 34_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 35_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 3_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 4_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 5_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 6_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 7_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 8_1_Sca1+, alpha-7-int-_FAPs.fcs | | ._export_mouse 9_1_Sca1+, alpha-7-int-_FAPs.fcs | | | +---M1 Macrophages | | ._.DS_Store | | ._export_mouse 10_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 11_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 12_0_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 13_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 14_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 15_1_0_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 16_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 17_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 18_1_0_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 19_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 1_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 20_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 21_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 22_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 23_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 24_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 25_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 26_1_0_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 27_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 28_0_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 29_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 2_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 30_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 31_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 32_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 33_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 34_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 35_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 3_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 4_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 5_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 6_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 7_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 8_1_CD11b+, CD45+_M1 Macrophages.fcs | | ._export_mouse 9_1_CD11b+, CD45+_M1 Macrophages.fcs | | | +---M2 Macrophages | | ._.DS_Store | | ._export_mouse 10_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 11_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 12_0_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 13_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 14_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 15_1_0_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 16_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 17_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 18_1_0_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 19_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 1_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 20_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 21_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 22_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 23_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 24_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 25_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 26_1_0_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 27_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 28_0_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 29_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 2_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 30_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 31_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 32_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 33_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 34_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 35_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 3_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 4_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 5_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 6_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 7_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 8_1_CD11b+, CD45+_M2 Macrophages.fcs | | ._export_mouse 9_1_CD11b+, CD45+_M2 Macrophages.fcs | | | \---Satellite Cells | ._.DS_Store | ._export_mouse 10_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 11_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 12_0_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 13_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 14_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 15_1_0_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 16_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 17_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 18_1_0_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 19_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 1_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 20_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 21_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 22_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 23_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 24_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 25_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 26_1_0_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 27_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 28_0_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 29_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 2_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 30_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 31_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 32_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 33_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 34_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 35_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 3_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 4_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 5_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 6_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 7_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 8_1_Sca1-, alpha-7-int+_Satellite cells.fcs | ._export_mouse 9_1_Sca1-, alpha-7-int+_Satellite cells.fcs | \---Original data +---Original data | .DS_Store | Gating.wsp | mouse 10_Mo.fcs | mouse 11_Fo.fcs | mouse 12_Fo.fcs | mouse 13_Mo.fcs | mouse 14_Mo.fcs | mouse 15_Fo.fcs | mouse 16_Fo.fcs | mouse 17_Fy.fcs | mouse 18_Fy.fcs | mouse 19_My.fcs | mouse 1_Mo.fcs | mouse 20_My.fcs | mouse 21_Mo.fcs | mouse 22_Mo.fcs | mouse 23_Mo.fcs | mouse 24_Mo.fcs | mouse 25_My.fcs | mouse 26_My.fcs | mouse 27_Fy.fcs | mouse 28_Fy.fcs | mouse 29_My.fcs | mouse 2_Mo.fcs | mouse 30_My.fcs | mouse 31_Fy.fcs | mouse 32_Fy.fcs | mouse 33_My.fcs | mouse 34_Fy.fcs | mouse 35_Fy.fcs | mouse 3_Fo.fcs | mouse 4_Fo.fcs | mouse 5_My.fcs | mouse 6_My.fcs | mouse 7_Fy.fcs | mouse 8_Fy.fcs | mouse 9_Mo.fcs | \---__MACOSX | ._Original data | \---Original data ._.DS_Store ._Gating.wsp ._mouse 10_Mo.fcs ._mouse 11_Fo.fcs ._mouse 12_Fo.fcs ._mouse 13_Mo.fcs ._mouse 14_Mo.fcs ._mouse 15_Fo.fcs ._mouse 16_Fo.fcs ._mouse 17_Fy.fcs ._mouse 18_Fy.fcs ._mouse 19_My.fcs ._mouse 1_Mo.fcs ._mouse 20_My.fcs ._mouse 21_Mo.fcs ._mouse 22_Mo.fcs ._mouse 23_Mo.fcs ._mouse 24_Mo.fcs ._mouse 25_My.fcs ._mouse 26_My.fcs ._mouse 27_Fy.fcs ._mouse 28_Fy.fcs ._mouse 29_My.fcs ._mouse 2_Mo.fcs ._mouse 30_My.fcs ._mouse 31_Fy.fcs ._mouse 32_Fy.fcs ._mouse 33_My.fcs ._mouse 34_Fy.fcs ._mouse 35_Fy.fcs ._mouse 3_Fo.fcs ._mouse 4_Fo.fcs ._mouse 5_My.fcs ._mouse 6_My.fcs ._mouse 7_Fy.fcs ._mouse 8_Fy.fcs ._mouse 9_Mo.fcs