This codebook.txt file was generated on <20211005> ------------------- GENERAL INFORMATION ------------------- Recommended citation for the data: Grinde, Alexis R. (2021). Wildlife community data in black ash wetlands. Retrieved from the Data Repository for the University of Minnesota, https://doi.org/10.13020/4h0j-zz39. 1. Title of Dataset: Wildlife community data in black ash wetlands 2. Author Information Principal Investigator Contact Information Name: Alexis Grinde Institution: University of Minnestoa Duluth Email: agrinde@d.umn.edu ORCID: 0000-0001-7141-0494 3. Date of data collection: 2016-09-20 to 2018-10-20 4. Geographic location of data collection (where was data collected?): northern Minnesota, USA. 5. Information about funding sources that supported the collection of the data: Sponsorship: Minnesota Environment and Natural Resources Trust Fund -------------------------- SHARING/ACCESS INFORMATION -------------------------- 1. Licenses/restrictions placed on the data: CC0 1.0 Universal 2. Links to publications that cite or use the data: AR Grinde, MB Youngquist, M., RA Slesak, SR Kolbe, D Bednar, BJ Palik, B. and AW D'Amato, 2022. Potential impacts of emerald ash borer and adaptation strategies on wildlife communities in black ash wetlands. Ecological Applications, p.e2567. https://doi.org/10.1002/eap.2567 3. Links to other publicly accessible locations of the data: No 4. Links/relationships to ancillary data sets: NA --------------------- DATA & FILE OVERVIEW --------------------- 1. File List A. Filename: birddataref.csv Short description: bird community point count data for reference sites B. Filename: birdsexp.csv Short description: bird community point count data for experimental sites C. Filename: cameratrapdata.csv Short description: camera trap data for experimental sites D. Filename: frogdata.csv Short description: amphibian call and larval data E. Filename: smallmammals.csv Short description: small mammal data for experimental stands F. Filename: birdabbrevname_lookuptable.csv Short description:bird abbreviation names table 2. Relationship between files: Data collected on amphibian, bird, and mammal communities in black ash wetlands in northern Minnesota, USA. -------------------------- METHODOLOGICAL INFORMATION -------------------------- 1. Description of methods used for collection/generation of data: 2. Methods for processing the data: 3. Instrument- or software-specific information needed to interpret the data: 4. Standards and calibration information, if appropriate: 5. Environmental/experimental conditions: 6. Describe any quality-assurance procedures performed on the data: 7. People involved with sample collection, processing, analysis and/or submission: ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: birddataref.csv ----------------------------------------- 1. Number of variables:80 2. Number of cases/rows: 34 3. Missing data codes: Code/symbol Definition Code/symbol Definition 4. Variable List Variable Description ID Site ID site_name Site name TMT treatment type (C= control; BA= black ash- together these sites types are referred to as reference sites) standarea Area of black ash stand standht Mean 75th percentile of non-ground return height; calculated by taking the mean of all raster pixels within the stand polygon; represents average stand height of entire stand area standht_STD Standard deviation of 75th percentile of nonground return height; calculated by taking the standard deviation of all raster pixels within the stand polygon; represents variability in stand height across each stand area cancov1 Mean canopy cover value for stand, calculated using first returns only cancov1_STD Standard deviation in canopy cover values for stand, calculated using first returns only; represents variability in canopy cover undercov Mean understory cover index undercov_STD Standard deviation in understory cover index values pcan9m Proportion of stand area classified as canopy using the 9 m threshold pcan2m Proportion of stand area classified as canopy using the 2 m threshold ashpcov Percent ash canopy cover AshtDBH Average diameter at breast heght for aspen trees abundance Total number of individual birds counted richness Species richness, the total number of species observed diversity Shannon-weiner diversity index for birds observed at each site ALFL Alder Flycatcher AMGO American Goldfinch AMRE American Redstart AMRO American Robin BAOR Baltimore Oriole BAWW Black-and-white Warbler BCCH Black-capped Chickadee BHCO Brown-headed Cowbird BLBW Blackburnian Warbler BLJA Blue Jay BRCR Brown Creeper BTNW Black-throated Green Warbler BWHA Broad-winged Hawk CAWA Canada Warbler CEDW Cedar Waxwing CHSP Chipping Sparrow COGR Common Grackle COYE Common Yellowthroat CSWA Chestnut-sided Warbler DOWO Downy Woodpecker EAKI Eastern Kingbird EAWP Eastern Wood-Pewee GCFL Great Crested Flycatcher GCKI Golden-crowned Kinglet GRCA Gray Catbird GWWA Golden-winged Warbler HAWO Hairy Woodpecker HETH Hermit Thrush INBU Indigo Bunting LEFL Least Flycatcher LISP Lincoln's Sparrow MAWA Magnolia Warbler MOWA Mourning Warbler MYWA Yellow-rumped Warbler (Myrtle) NAWA Nashville Warbler NOPA Northern Parula NOWA Northern Waterthrush OVEN Ovenbird PIWA Pine Warbler PIWO Pileated Woodpecker PUFI Purple Finch RBGR Rose-breasted Grosbeak RBNU Red-breasted Nuthatch REVI Red-eyed Vireo RTHU Ruby-throated Hummingbird RUGR Ruffed Grouse RWBL Red-winged Blackbird SCTA Scarlet Tanager SEWR Sedge Wren SOSP Song Sparrow SWSP Swamp Sparrow VEER Veery WBNU White-breasted Nuthatch WIWR Winter Wren WOTH Wood Thrush WTSP White-throated Sparrow YBFL Yellow-bellied Flycatcher YBSA Yellow-bellied Sapsucker YSFL Northern Flicker (Yellow-shafted) YTVI Yellow-throated Vireo YWAR Yellow Warbler ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: birdsexp.csv ----------------------------------------- 1. Number of variables: 64 2. Number of cases/rows: 33 3. Missing data codes: Code/symbol Definition Code/symbol Definition 4. Variable List site_name Site name TMT treatment type (C= control; BA= black ash- together these sites types are referred to as reference sites) Total Of howmany Sum of individual observations ALFL Alder Flycatcher AMGO American Goldfinch AMRE American Redstart AMRO American Robin BAOR Baltimore Oriole BAWW Black-and-white Warbler BCCH Black-capped Chickadee BHCO Brown-headed Cowbird BLBW Blackburnian Warbler BLJA Blue Jay BRCR Brown Creeper BTNW Black-throated Green Warbler BWHA Broad-winged Hawk CAWA Canada Warbler CEDW Cedar Waxwing CHSP Chipping Sparrow COGR Common Grackle COYE Common Yellowthroat CSWA Chestnut-sided Warbler DOWO Downy Woodpecker EAKI Eastern Kingbird EAWP Eastern Wood-Pewee GCFL Great Crested Flycatcher GCKI Golden-crowned Kinglet GRCA Gray Catbird GWWA Golden-winged Warbler HAWO Hairy Woodpecker HETH Hermit Thrush INBU Indigo Bunting LEFL Least Flycatcher LISP Lincoln's Sparrow MAWA Magnolia Warbler MOWA Mourning Warbler MYWA Yellow-rumped Warbler (Myrtle) NAWA Nashville Warbler NOPA Northern Parula NOWA Northern Waterthrush OVEN Ovenbird PIWA Pine Warbler PIWO Pileated Woodpecker PUFI Purple Finch RBGR Rose-breasted Grosbeak RBNU Red-breasted Nuthatch REVI Red-eyed Vireo RTHU Ruby-throated Hummingbird RUGR Ruffed Grouse RWBL Red-winged Blackbird SCTA Scarlet Tanager SEWR Sedge Wren SOSP Song Sparrow SWSP Swamp Sparrow VEER Veery WBNU White-breasted Nuthatch WIWR Winter Wren WOTH Wood Thrush WTSP White-throated Sparrow YBFL Yellow-bellied Flycatcher YBSA Yellow-bellied Sapsucker YSFL Northern Flicker (Yellow-shafted) YTVI Yellow-throated Vireo YWAR Yellow Warbler ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: cameratrapdata.csv ----------------------------------------- 1. Number of variables: 16 2. Number of cases/rows: 17 3. Missing data codes: Code/symbol Definition Code/symbol Definition 4. Variable List Site Site name rich species richness American marten Martes americana Red squirrel Tamiasciurus hudsonicus Bobcat Lynx rufus Coyote Canis latrans Gray squirrel Sciurus carolinensis Short-tailed weasel Mustela erminea Fisher Martes pennanti Gray wolf Canis lupus Gray fox Urocyon cinereoargenteus Moose Alces alces Northern raccoon Procyon lotor Red fox Vulpes vulpes Snowshoe hare Lepus americanus White-tailed deer Odocoileus virginianus ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: frogdata.csv ----------------------------------------- 1. Number of variables: 14 2. Number of cases/rows: 30 3. Missing data codes: NA Definition 4. Variable List site_name Site name TMT treatment type (C= control; BA= black ash- together these sites types are referred to as reference sites) richness species richness LISY Wood Frog PSCR Spring Peeper PSMA Boreal chorus frog HYCV Gray tree frog AMLA Blue-spotted Salamander larval_abund Total abundance of larva ldLISY larval density of Wood Frog ldPSCR larval density of Spring Peeper ldPSMA larval density of Boreal chorus frog ldHYCV larval density of Gray tree frog ldAMLA larval density of Blue-spotted Salamander ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: smallmammals.csv ----------------------------------------- 1. Number of variables:10 2. Number of cases/rows: 32 3. Missing data codes: Code/symbol Definition Code/symbol Definition 4. Variable List site_name Site name TMT treatment type (C= control; BA= black ash- together these sites types are referred to as reference sites) FLSQ Flying Squirrel MASH Masked Shrew MEVO Meadow Vole PERO Peromyscus sp. RBVO Red-backed Vole STSH Short-tailed Shrew STWE Short-tailed Weasel WASH Water Shrew ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: birdabbrevname_lookuptable.csv ----------------------------------------- 1. Number of variables: 4 2. Number of cases/rows: 61 3. Missing data codes: Code/symbol Definition Code/symbol Definition 4. Variable List